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SGA - String Graph Assembler

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Analyzed about 3 hours ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Sep 13, 2025 — Sep 13, 2026 Showing page 1 of 57 Search / Filter on:
Merge pull request #159 from cihga39871/sga-bin-multithreads	Jared Simpson	More...				about 7 years ago
fix devision by zero when bootstrap fails	Jiacheng Eric Chuan	More...				about 7 years ago
multithread for samtools sort in sga-align	Jiacheng Eric Chuan	More...				about 7 years ago
Update README	Jared Simpson	More...				almost 8 years ago
Merge pull request #150 from kastman/BF_SamtoolsAPIUpdate	Jared Simpson	More...				over 8 years ago
Like PR #123, use samtools >=1 `sort` format in sga-align script	Erik Kastman	More...				over 8 years ago
Merge pull request #148 from sjackman/abs	Jared Simpson	More...				over 8 years ago
Fix error: call to 'abs' is ambiguous	Shaun Jackman	More...				over 8 years ago
Merge pull request #143 from sjackman/patch-2	Jared Simpson	More...				over 8 years ago
sga-bam2de.pl: Use DistanceEst -l30	Shaun Jackman	More...				over 8 years ago
fix order of parameters to samtools sort	Jared Simpson	More...				about 10 years ago
v0.10.15	jsimpson	More...				about 10 years ago
Merge branch 'mateidavid-set-standard'	jsimpson	More...				about 10 years ago
set language standard	Matei David	More...				about 10 years ago
Merge pull request #123 from sjackman/samtools-sort	Jared Simpson	More...				about 10 years ago
sga-bam2de.pl: Fix samtools sort for samtools 1.3	Shaun Jackman	More...				about 10 years ago
place ifdef guard around OMP calls to fix #120	Jared Simpson	More...				about 10 years ago
Merge pull request #119 from Milt0n/master	Jared Simpson	More...				about 10 years ago
Merge pull request #1 from Milt0n/Milt0n-patch-1-DistanceEst	Cedric L	More...				about 10 years ago
Update sga-ecoli-miseq.sh, removal of DistanceEst	Cedric L	More...				about 10 years ago
Merge pull request #110 from mateidavid/fix-gcc6-c++14-friendly	Jared Simpson	More...				about 10 years ago
made code c++14 friendly	Matei David	More...				over 10 years ago
Merge pull request #103 from mr-c/patch-1	Jared Simpson	More...				over 10 years ago
typo fix, optionaly->optionally	Michael R. Crusoe	More...				over 10 years ago
spelling fix	Michael R. Crusoe	More...				over 10 years ago
Merge pull request #102 from ljdursi/dockerfile	Jared Simpson	More...				over 10 years ago
Add python+matplotlib, and example for running preqc-report	Jonathan Dursi	More...				over 10 years ago
Remove unnecessary dependency git; wgetting particular release version, not using git to get current master	Jonathan Dursi	More...				over 10 years ago
Have workdir be a volume /data	Jonathan Dursi	More...				over 10 years ago
Add initial pass of Dockerfile to repository	Jonathan Dursi	More...				over 10 years ago

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