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Commits : Listings

Analyzed about 9 hours ago. based on code collected about 23 hours ago.
Aug 22, 2025 — Aug 22, 2026
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Extending error message
Denis Yuen
More... over 13 years ago
Preliminary work on avoiding symlink null error
Denis Yuen
More... over 13 years ago
Initial implementation of multi-threaded status checker and tests via Mockito, PowerMock
Denis Yuen
More... over 13 years ago
Commit to fir for locking issue (and hopefully that explains part of this JIRA bug as well)
Denis Yuen
More... over 13 years ago
This is a very simple directory-bulk S3 uploader.
Brian O'Connor
More... over 13 years ago
Merge pull request #38 from SeqWare/feature/SEQWARE-1439_clean_symbolic_link
Denis Yuen
More... over 13 years ago
Testing with Mockito for existing WorkflowStatusChecker
Denis Yuen
More... over 13 years ago
Since there is a still a problem with WorkflowRunReport reporting ALL of the input files (e.g. fastq and bam files), I added a check to filter the list of previous files by meta-type. Only the file types in the decider are included in the check. I also clarified one of the logging statements (I was extremely alarmed when the decider informed me that it was failing a run because it didn't have a status of failed).
Morgan Taschuk
More... over 13 years ago
I added code to correctly pass memory requirements to the Oozie engine (workflow.xml) and also added some code that replaces the workflow_bundle_dir variable in ini files. This really needs to be fleshed out to ensure all magic variables are handled correctly.
Brian O'Connor
More... over 13 years ago
pom.xml updates
Denis Yuen
More... over 13 years ago
Merge pull request #36 from SeqWare/feature/SEQWARE-1427
Denis Yuen
More... over 13 years ago
Fixing hard System.exit call in DaxGenerator also added a defensive try,catch in the workflow launcher.
Denis Yuen
More... over 13 years ago
Adding a few additional tests, ready for another look
Denis Yuen
More... over 13 years ago
Fixed a problem with an oozie object. Also, shouldn't all our apps point to the test DB by default since that gets setup in the maven build process!?
Brian O'Connor
More... over 13 years ago
Working on the docs, adding in Oozie information
Brian O'Connor
More... over 13 years ago
Working on improvements to the oozie backend, things were slightly broken and remain unstable for now.
Brian O'Connor
More... over 13 years ago
Trying to construct the right params to ProvisionFiles
Brian O'Connor
More... over 13 years ago
Trying to correctly construct the local path
Brian O'Connor
More... over 13 years ago
Working on small bug fixes in the Oozie workflow engine.
Brian O'Connor
More... over 13 years ago
Merge branch 'feature/SEQWARE-1400_oozie_improvements' of https://github.com/SeqWare/seqware into develop
seqware
More... over 13 years ago
Initial implementation of BasicDecider grabbing workflow_run and failed/running workflow_runs.
Denis Yuen
More... over 13 years ago
Minor decider changes
Denis Yuen
More... over 13 years ago
Integration tests and fixes to BasicDecider in progress
Denis Yuen
More... over 13 years ago
Merge pull request #35 from SeqWare/feature/SEQWARE-1435
Denis Yuen
More... over 13 years ago
Start work on integration tests for BasicDecider
Denis Yuen
More... over 13 years ago
SEQWARE-1435 Permit multiple files to hang off of a single processing node.
Tony DeBat
More... over 13 years ago
Merge branch 'develop' into feature/feature-SEQWARE-1341
Denis Yuen
More... over 13 years ago
Merge branch 'feature/feature-SEQWARE-1341' of github.com:SeqWare/seqware into feature/feature-SEQWARE-1341
Denis Yuen
More... over 13 years ago
Explicitly set character encoding of FileLinker input csv file to UTF-8.
Tony DeBat
More... over 13 years ago
Decider documentation stub
Denis Yuen
More... over 13 years ago