SeqWare Queryengine

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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Aug 11, 2025 — Aug 11, 2026 Showing page 22 of 71 Search / Filter on:
Just moving the template	Brian O'Connor	More...				about 13 years ago
I think this is getting pretty close. It should build SeqWare and also setup an environment on the vagrant host for the full integration testing	Brian O'Connor	More...				about 13 years ago
Saving work in progress on fix for multiple files attached to processing event	Denis Yuen	More...				about 13 years ago
Use wording consistent with current CLI.	Alexander Taggart	More...				about 13 years ago
Reverting changes to docs until CLI has been reviewed.	Alexander Taggart	More...				about 13 years ago
Tweak messaging.	Alexander Taggart	More...				about 13 years ago
Use "meta-type"	Alexander Taggart	More...				about 13 years ago
Use "accession".	Alexander Taggart	More...				about 13 years ago
Expose engine flag on workflow schedule.	Alexander Taggart	More...				about 13 years ago
Handle relative dirs during packaging, since BundleManager doesn't.	Alexander Taggart	More...				about 13 years ago
Enable console printing of workflow run report.	Alexander Taggart	More...				about 13 years ago
Rename how reporting works in CLI.	Alexander Taggart	More...				about 13 years ago
Initial tracking for input files	Denis Yuen	More...				about 13 years ago
First pass of updating tutorial with new CLI.	Alexander Taggart	More...				about 13 years ago
Add command to generate workflow ini.	Alexander Taggart	More...				about 13 years ago
Note which fields have dynamic values	Alexander Taggart	More...				about 13 years ago
move debug flag handling	Alexander Taggart	More...				about 13 years ago
Handle propagating args with spaces	Alexander Taggart	More...				about 13 years ago
Actually pass arguments to main.	Alexander Taggart	More...				about 13 years ago
Better handling of password entry.	Alexander Taggart	More...				about 13 years ago
Doc change	Alexander Taggart	More...				about 13 years ago
Trigger interactive creation of seqware settings file.	Alexander Taggart	More...				about 13 years ago
Update seqware script to use current snapshot seqware version, and pull from local maven repo.	Alexander Taggart	More...				about 13 years ago
Add bundle commands; remove inappropriate quoting of args to PluginRunner; expose --debug; temporarily removed visibility controls.	Alexander Taggart	More...				about 13 years ago
Fix logic bug in Module regarding argument quoting whereby a fully quoted argument and every subsequent argument would be lost.	Alexander Taggart	More...				about 13 years ago
Adding some items for OS	Brian O'Connor	More...				about 13 years ago
Change to use sw_accession, we can't constrain this in the DB	Denis Yuen	More...				about 13 years ago
Start implementation of input_files collection for workflow_run	Denis Yuen	More...				about 13 years ago
First pass at create commands.	Alexander Taggart	More...				about 13 years ago
Implement more features.	Alexander Taggart	More...				about 13 years ago

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