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Analyzed 4 days ago. based on code collected 4 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Mar 11, 2025 — Mar 11, 2026 Showing page 1 of 31 Search / Filter on:
Merge pull request #239 from mdshw5/bgzf_index_empty_block	Matt Shirley	More...				6 months ago
Keep first empty bgzf block in index. Add tests for #238	Matt Shirley	More...				6 months ago
Merge pull request #237 from ggydush/ggydush/add-long-name-support-bgzf	Matt Shirley	More...				6 months ago
Add test for make_virtual_offset	Matt Shirley	More...				6 months ago
feat: Add long name support for bgzf files	ggydush	More...				6 months ago
Merge pull request #235 from mdshw5/dev	Matt Shirley	More...				7 months ago
Add tests for FastaVariant and sequence masking	Matt Shirley	More...				7 months ago
Merge pull request #234 from mdshw5/dev	Matt Shirley	More...				7 months ago
Add more tests	Matt Shirley	More...				7 months ago
Remove unused Counter class	Matt Shirley	More...				7 months ago
Mark tests as expected to fail, indicating that they are known to raise exceptions.	Matt Shirley	More...				7 months ago
Don't run doctest for Sequence.long_name	Matt Shirley	More...				7 months ago
Run doctests	Matt Shirley	More...				7 months ago
Merge pull request #233 from mdshw5/issue_228	Matt Shirley	More...				7 months ago
Merge pull request #232 from ggydush/ggydush/add-gzi-index-support	Matt Shirley	More...				7 months ago
feat: Add bgzip index support for fsspec file objects	ggydush	More...				7 months ago
Merge pull request #164 from mdshw5/samtools_bgzf_compatibility	Matt Shirley	More...				7 months ago
Expand test suite based on coverage gaps	Matt Shirley	More...				7 months ago
Remove unused gzi packing functions.	Matt Shirley	More...				7 months ago
Make sure to re-create .fai if .gzi is not present. Avoid incompatibility with pyfaidx <0.9	Matt Shirley	More...				7 months ago
Ensure on-disk .gzi format matches htslib output	Matt Shirley	More...				7 months ago
Remove redundant funcitons and clean up	Matt Shirley	More...				7 months ago
Add python 3.13 to test matrix	Matt Shirley	More...				7 months ago
Working implementation of more efficient bgzip FASTA indexed retrieval	Matt Shirley	More...				7 months ago
Fix BgzfBlock.empty logic	Matt Shirley	More...				7 months ago
Merge upstream changes	Matt Shirley	More...				7 months ago
Merge pull request #231 from mdshw5/issue_230	Matt Shirley	More...				7 months ago
Update test data and tests fixes #230	Matt Shirley	More...				7 months ago
Merge remote-tracking branch 'origin/master' into samtools_bgzf_compatibility	Matt Shirley	More...				7 months ago
Merge pull request #227 from mdshw5/keep-line-endings	Matt Shirley	More...				7 months ago

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