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Commits
: Listings
Analyzed
about 5 hours
ago. based on code collected
about 5 hours
ago.
Jun 06, 2024 — Jun 06, 2025
Showing page 26 of 28
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Commit Message
Contributor
Files Modified
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Code Location
Date
bug fix
Pierre Bellec
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over 16 years ago
added two different options for the mode of the pipeline manager and the mode of the pipeline itself.
Pierre Bellec
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over 16 years ago
The function to get status is now making only one system call, at the price of increased memory use.
Pierre Bellec
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over 16 years ago
bug fix
Pierre Bellec
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over 16 years ago
oups I forgot another small maybe-improvement.
Pierre Bellec
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over 16 years ago
yet another attempt to speed up the manager. It actually appears to be due to a NFS problem which awfully slow down the system calls in the log folder because of the high number of files (there are a couple of tens of thousand files when there are 5000 jobs). I have tried to avoid unecessary system calls, even at the price of leaving crap behind.
Pierre Bellec
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over 16 years ago
Desesperate attempt to speed up the pipeline manager.
Pierre Bellec
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over 16 years ago
added some verbose to help debug what is making the pipeline so slow.
Pierre Bellec
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over 16 years ago
Attempt to speed up the pipeline manager. The reason for it to be so slow are far from clear.
Pierre Bellec
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over 16 years ago
well a new bug fix this time .
Pierre Bellec
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over 16 years ago
ggrrr the same bug fix at another line....
Pierre Bellec
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over 16 years ago
bug fix in the last commit
Pierre Bellec
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over 16 years ago
The pipeline manager now qsub itself in qsub mode to avoid stealing out resources.
Pierre Bellec
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over 16 years ago
Re-implemented parts of the pipeline processing tool to use a sparse matrix rather than a structure to define dependencies. Hopefully the pipeline manager will achieve reasonable performances even with very big pipelines now.
Pierre Bellec
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over 16 years ago
oups, I had left some test junk in the demo script.
Pierre Bellec
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over 16 years ago
First a vicious bug fix. The evaluation of status for one job are now made in a very narrow time window and in a specific order, such that there cannot be incoherent result any more (which was the case often before because of the way the 'exit' tag was implemented).
Pierre Bellec
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over 16 years ago
minor modif.
Pierre Bellec
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over 16 years ago
replaced the 'save empty file' strategy by a 'touch' to create tag files. I hope this is going to solve the problem of ghost processes in qsub...
Pierre Bellec
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over 16 years ago
Robust behavior when qsub terminates a job in a weird state.
Pierre Bellec
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over 16 years ago
yet another bug fix in the management of crashed scripts in qsub or batch modes.
Pierre Bellec
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over 16 years ago
Well this time the pipeline manager should deal correctly with crashed scripts in qsub or batch modes.
Pierre Bellec
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over 16 years ago
well, that small additional feature is revealing itself pretty tough.
Pierre Bellec
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over 16 years ago
forgot something again grrrrrrrrr.
Pierre Bellec
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over 16 years ago
a bug in the last bug fix. Well ... no comment
Pierre Bellec
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over 16 years ago
fixed up another bug in the qsub mode.
Pierre Bellec
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over 16 years ago
bug fix in qsub mode.
Pierre Bellec
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over 16 years ago
test.
Pierre Bellec
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over 16 years ago
A new feature in the pipeline manager : it can deal with script crash in qsub.
Pierre Bellec
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over 16 years ago
small improvement.
Pierre Bellec
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over 16 years ago
bug fix.
Pierre Bellec
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over 16 years ago
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