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Commits : Listings

Analyzed about 20 hours ago. based on code collected about 20 hours ago.
Jun 06, 2024 — Jun 06, 2025
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Minor improvements: 1. No system feedback when submitting jobs in 'qsub' or 'msub' modes. The system verbose was creeping into PSOM verbose, which did not look good at all. 2. Make sure the "exit" and "eqsub/oqsub" files are generated before cleaning up after a job, in msub mode (this was already the case in qsub mode).
Pierre Bellec
More... over 13 years ago
Even more compact verbose for job submission/completion/failure.
Pierre Bellec
More... over 13 years ago
Improved verbose (more compact) when listing job submission/completion/failure.
Pierre Bellec
More... over 13 years ago
Bug fix: the default value for MAX_QUEUED specified in PSOM_GB_VARS was ignored in PSOM_CONFIG.
Pierre Bellec
More... over 13 years ago
Bug fix: the default for MAX_QUEUED in PSOM_GB_VARS.M was ignored.
Pierre Bellec
More... over 13 years ago
Added a new option to change the behavior of OPT.RESTART. The default is similar to what was implemented before (restart any job whose name contains a string listed in OPT.TYPE_RESTART). Another option is now available to exactly match the name of jobs.
Pierre Bellec
More... over 13 years ago
Minor change in PSOM_UPDATE_SVN, a new command to get the status of all SVN repositories.
Pierre Bellec
More... over 13 years ago
Renamed "quarentine" to "quarantine". Also added a '-' between the name of an SVN library and its version when naming folders in a quarantine. Finally, made several minor improvements in the doc of PSOM_QUARANTINE_SVN.
Pierre Bellec
More... over 13 years ago
Added a flag in PSOM_DEFAULTS to avoid issuing warnings in unrecognized fields (this is useful to set the defaults of a subpart of the options of a brick prior to a call to that brick).
Pierre Bellec
More... over 13 years ago
- bug fix in the psom_version_svn verbose
Christian Dansereau
More... over 13 years ago
- add new functionality to psom_version_svn - add header modification to psom_quarentine_svn
Christian Dansereau
More... over 13 years ago
Many minor improvements in the doc and the demo.
Pierre Bellec
More... over 13 years ago
- add comments to psom_quarentine_svn - fix a display bug with spom_update_svn
Christian Dansereau
More... over 13 years ago
- add psom_quarentine_svn to create quarentine repository - fix bug in the verbose of psom_version_svn - fix a pipe message proble for octave 2>&1
Christian Dansereau
More... over 13 years ago
-New function to update all svn rep found with psom_version_svn -Optimisation of psom_version_svn and compatibility with octave
Christian Dansereau
More... over 13 years ago
Add a new function psom_version_svn.m
Christian Dansereau
More... over 13 years ago
Last modifs for release 0.9
Pierre Bellec
More... over 13 years ago
Bug fix for the case where OPT_PIPE equals 'gb_psom_omitted' (use the default path at Matlab/Octave start-up).
Pierre Bellec
More... over 13 years ago
A bunch of bug fix for windows (and linux, when the name of the logs folder contains spaces).
Pierre Bellec
More... over 13 years ago
The function PSOM_WRITE_PIPE2XML is deprecated (replaced by PSOM_WRITE_PIPELINE2XML).
Pierre Bellec
More... over 13 years ago
An attempt to fix windows issues related to ' ' in file/folder names by adding quotes.
Pierre Bellec
More... over 13 years ago
New test to fix compatibility with Matlab/windows : got rid of the '.' command when running a script in matlab/windows. Windows allows to directly invoke a batch script.
Pierre Bellec
More... over 13 years ago
1. Improvement : the logs should now be more complete with Octave. Octave is not redirecting the error stream in system calls. Some errors thus may have been lost in the previous implementation of PSOM_RUN_SCRIPT. The error stream is now redirected to the output stream when making a system call. That solves this issue. 2. A bunch of new test in PSOM_CONFIG. Those tests are a bit hard to follow : they test the behavior of job submission by the pipeline manager, which is itself a process submitted for (possibly remote) execution in a separate matlab session. In other words, it's a call to a separate session started by a separate session started by the work session, aka a grand-children. These tests will however be very useful to set up the configuration of PSOM. It is a common (and tricky) issue that the pipeline manager starts fine (say in batch mode) and then the jobs never get submitted (say in qsub mode). All the tests are there and should be working.
Pierre Bellec
More... over 13 years ago
A bit more work on the configuration test. Not quite there yet, but almost done.
Pierre Bellec
More... over 13 years ago
A bit more work on PSOM_CONFIG. Also, the batch jobs are now started asynchronously to allow jobs to run on cygwin.
Pierre Bellec
More... over 13 years ago
All the tests for the pipeline manager in PSOM_CONFIG should now be working. The tests for the job manager still need to be implemented.
Pierre Bellec
More... over 13 years ago
Changed a bit the way the search path is handled to be able to pass it to PSOM_RUN_SCRIPT. Also a stub of a function to test PSOM configuration and generate sensible error messages. May not be necessary with the recent improvements of the pipeline manager though ...
Pierre Bellec
More... over 13 years ago
Bug fix (default temporary folder).
Pierre Bellec
More... over 13 years ago
Bug fix for recent versions of Matlab in the 'time' option of PSOM_PIPELINE_VISU
Pierre Bellec
More... over 13 years ago
The default temporary folder is now system-dependent.
Pierre Bellec
More... over 13 years ago