| Added Phos |
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over 7 years ago
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| Tweaked masses |
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over 7 years ago
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| Fixed test |
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over 7 years ago
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| Fixed tests |
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over 7 years ago
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| Fixed tests |
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over 7 years ago
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| Tidied up mass additives |
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over 7 years ago
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| Periodic memory flushing for idents |
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over 7 years ago
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| Fixed handling of mixed decoy/target databases when assigning isDecoy |
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over 7 years ago
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| Added simple filtering by rank to reduce identifications produced |
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over 7 years ago
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| Added simple periodic flushing to control memory usage |
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over 7 years ago
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| Added support for calculating FDR Added support for creating mzidentml files |
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over 7 years ago
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| Fixed division by zero error if a m/z is already a neutral mass |
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over 7 years ago
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| Fixed handling of ANY residues in mzidentml and MS-GF+ param generator |
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almost 8 years ago
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| Fixed modification residues allowing [ and ] Added support for protein decoys in mzidentml |
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almost 8 years ago
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| Tweaked handling of charge-less records |
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almost 8 years ago
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| Fixed MzIdentMlReader searching for additional search params if none are present. |
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almost 8 years ago
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| Improved detection of software package name in MzIdentmlReader |
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almost 8 years ago
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| Updated U to use formula including H2O |
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about 8 years ago
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| Added "U" to composition reference table Added support for Selenium in peptide composition |
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about 8 years ago
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| Added rank sorting to IdentificationSort |
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about 8 years ago
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| Fixed tests for previous mz changes Added support for chunked http response in mascot search |
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about 8 years ago
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| Added ChargedMassTrait to provide consistent support for mz values. Note breaking charges to setMassCharge |
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about 8 years ago
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| Added planning notes |
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about 8 years ago
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| no message |
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about 8 years ago
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| Updated ion trait to factor in missing mass values |
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about 8 years ago
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| Moved average and monoisotopic mass methods to trait to provide consistency to objects |
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about 8 years ago
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| Addition of Chemical and Physical constants file. Currently only contains constants used internally. Deprecated original constant sites and updated internal usages. |
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about 8 years ago
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| Fixed unit test comparison failing on Fragment Ions B |
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about 8 years ago
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| Updated Fragment Ion generators to support generating ions at specified charge values |
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about 8 years ago
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| Fixed modifiable sequence interface not supporting clearing of modifications Fixed ion interface not supporting retention times Added support for any whitespace delimiter in fragment ion list of MGF Added support for utility classes to increase ease of sorting data arrays. |
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about 8 years ago
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