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php-ms-example

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Analyzed about 10 hours ago. based on code collected about 10 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jul 29, 2024 — Jul 29, 2025 Showing page 2 of 3 Search / Filter on:
Fixed bad constant reference in mzidentml viewer	Andrew Collins as detritus	More...				over 7 years ago
Updated to use 1.* branch of phpMs	Andrew Collins as detritus	More...				over 7 years ago
Fixed ordering of reversed fragments Added menu to fasta viewer	Andrew Collins as detritus	More...				over 7 years ago
Added support for fragmentation method to fragment generator	Andrew Collins as detritus	More...				almost 8 years ago
Added support for A and X ions	Andrew Collins as detritus	More...				almost 8 years ago
Fixed HTML validation issues	Andrew Collins as detritus	More...				almost 8 years ago
Set 5ppm as default on MS-GF+ search Tweaked text in footer and mzid2probed	Andrew Collins as detritus	More...				almost 8 years ago
Update README.md	Andrew Collins as detritus	More...				almost 8 years ago
Fixed fasta path	Andrew Collins as detritus	More...				almost 8 years ago
no message	Andrew Collins as detritus	More...				almost 8 years ago
Added auto-download of sample fasta files to build file	Andrew Collins as detritus	More...				almost 8 years ago
Fixed warning if fasta data folder is missing	Andrew Collins as detritus	More...				almost 8 years ago
Added conversion time information to mzid2probed Added composer.lock to ant clean	Andrew Collins as detritus	More...				almost 8 years ago
Changed accession to identifier in FASTA viewer	Andrew Collins as detritus	More...				almost 8 years ago
Fixed handling of empty file uploads	Andrew Collins as detritus	More...				almost 8 years ago
Added sequence coverage tool Added mzid to probed converter Added m/z value to peptide properties Updated to support phpMs API changes Fixed protein digestion timing out before completion by increasing to 10min timeout	Andrew Collins as detritus	More...				almost 8 years ago
Disabled scan field in mzid viewer if not present Highlighted decoys in mzid viewer Tweaked formatting for peptide properties when using long sequences	Andrew Collins as detritus	More...				almost 8 years ago
Fixed incorrect placement of table closure tag	Andrew Collins as detritus	More...				almost 8 years ago
Fixed CheckStyle issues	Andrew Collins as detritus	More...				almost 8 years ago
Added placeholder tests folder to stop static analysis failing	Andrew Collins as detritus	More...				almost 8 years ago
Updated CodeSniffer version	Andrew Collins as detritus	More...				almost 8 years ago
Various Sonar fixes	Andrew Collins as detritus	More...				almost 8 years ago
Added Decoy support to MS-GF+ search Tweaked mzIdentML peptide interface	Andrew Collins as detritus	More...				almost 8 years ago
Fixed Sonar issues	Andrew Collins as detritus	More...				almost 8 years ago
Improved formatting of mzIdentML peptides view Added support for MS-GF+ search	Andrew Collins as detritus	More...				almost 8 years ago
Add modified mass value along with unmodified mass value to peptide fragmentation page	Andrew Collins	More...				almost 8 years ago
Fixed exception if no mods provided in peptide fragmenter	Andrew Collins as detritus	More...				almost 8 years ago
Fixed sonar CSS issues	Andrew Collins	More...				almost 8 years ago
Fixed sonar issues	Andrew Collins	More...				almost 8 years ago
Fixed CSS format error	Andrew Collins	More...				almost 8 years ago

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