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Analyzed about 1 month ago. based on code collected about 1 month ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
May 16, 2024 — May 16, 2025 Showing page 746 of 752 Search / Filter on:
added plot of trait priors and posteriors	David LeBauer	More...				over 14 years ago
fixed SA to calculate and plot per.var correctly	David LeBauer	More...				over 14 years ago
changed function to output madata.Rdata; actual trait data used in meta-analysis	David LeBauer	More...				over 14 years ago
removed EDOUT envt vars, obsolete	David LeBauer	More...				over 14 years ago
added env.vars.sh; running \". ./env.vars.sh\" sets PECANHOME, PECANOUT, EDIN, and EDOUT envt vars	David LeBauer	More...				over 14 years ago
added variable q to SA to allow modification of quantiles at which model is evaluated	David LeBauer	More...				over 14 years ago
simplified pecan.init.sh script	David LeBauer	More...				over 14 years ago
simplified pecan.send.jobs by replacing long quoted string of commands with ssh -T ebi-cluster < script.sh, and putting the commands inside the script	David LeBauer	More...				over 14 years ago
output list madata as madata.Rdata, data used in analysis	David LeBauer	More...				over 14 years ago
added pdf plots	David LeBauer	More...				over 14 years ago
start of day commit	David LeBauer	More...				over 14 years ago
corrected elasticity calculation	David LeBauer	More...				over 14 years ago
finished updating meta-analysis to truncate the first half of the chain and thin based on autocorrelation, up to lag=25 or if autocorr lag > 25, thin interval = 50.	David LeBauer	More...				over 14 years ago
updated README file to include info on setup	David LeBauer	More...				over 14 years ago
added empty out/ directory to bzr checkout	David LeBauer	More...				over 14 years ago
added some scripts to initialize pecan, build PECAn R library, and list ed runs that end in error	David LeBauer	More...				over 14 years ago
added display for module error messages	David LeBauer	More...				over 14 years ago
reduced length of samples to min chain length	David LeBauer	More...				over 14 years ago
updated to automatically trim 1/2 of the chain and set a thinning interval at min(50, where autocorr.diag < 0	David LeBauer	More...				over 14 years ago
removed printing of entire data-set with each run	David LeBauer	More...				over 14 years ago
added automated burn-in based on gelman-rubin diagnostic	David LeBauer	More...				over 14 years ago
added TODO and ma.model.template.bug files	David LeBauer	More...				over 14 years ago
reduced x axis limits on autocorr plots to 5000	David LeBauer	More...				over 14 years ago
remove config from out directory files after zipping them	David LeBauer	More...				over 14 years ago
added sink to send output to log file meta-analysis.log, changed code to write a string with the regression model parameters needed based on contents of the data set	David LeBauer	More...				over 14 years ago
added dynamic regression model - parameters based on data set	David LeBauer	More...				over 14 years ago
replaced ma.model.R function with ma.model.jag, devloping code to write model based on the number of levels of treatments, sites, and greenhous factors; also worked on plotting the SA some but there is still an error	David LeBauer	More...				over 14 years ago
returned grid.arrange to the function to make a 'tryptich'	David LeBauer	More...				over 14 years ago
fixed error: Error in data.frame(x = integer(0), y = 1, label = c(17L, 1L, 20L, 6L, : arguments imply differing number of rows: 0, 1, 19had to remove add 'factor(pr$figid)'	David LeBauer	More...				over 14 years ago
added rsync date from cluster to out dir	David LeBauer	More...				over 14 years ago

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