Open Hub
Black Duck Open Hub

 Settings |  Report Duplicate

1
I Use This!
Moderate Activity

Commits : Listings

Analyzed about 12 hours ago. based on code collected 1 day ago.
May 15, 2023 — May 15, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Update htscodecs to v1.6.0
Rob Davies
More... 5 months ago
Winter News 2023 (PR #1703)
Andrew Whitwham
More... 5 months ago
Update to latest htscodecs
Rob Davies
More... 5 months ago
Make output on unrecognised options go to stderr
Rob Davies
More... 5 months ago
Allow renaming of the default -a annotations (#1709)
Petr Danecek
More... 5 months ago
Limited usage text to 80 chars per line
vasudeva8
More... 5 months ago
Fix integer overflow in cram_compress_block2
James Bonfield
More... 5 months ago
Avoid undefined behaviour integer overflow in extend_ref
James Bonfield
More... 5 months ago
Move typecast to the right place
Rob Davies
More... 6 months ago
Ensure no-stored-sequence reads are counted in container size
Rob Davies
More... 6 months ago
Fix possible shift of negative value in cram_encode_aux()
Rob Davies
More... 6 months ago
Install annot-tsv.1 man page and alphabetise annot-tsv rules
John Marshall
More... 6 months ago
Compare as off_t (not size_t) and fix printf specifiers
John Marshall
More... 6 months ago
Disable hts_set_fai_filename call in hts_open_fuzzer.
James Bonfield
More... 6 months ago
Merge CRAM bug-fixes and fuzzing improvements (PR #1701)
Rob Davies
More... 6 months ago
Fix buffer read overrun in cram_encode_aux.
James Bonfield
More... 6 months ago
Reduce maxmimum BCF header len in fuzzer.
James Bonfield
More... 6 months ago
Further rewrite of the fuzz test harness
James Bonfield
More... 6 months ago
VCF parsing fix
Petr Danecek
More... 6 months ago
Tighten memory constraints for cram_decode.
James Bonfield
More... 6 months ago
Permit embed_ref=2 mode to be reenabled after using no_ref.
James Bonfield
More... 6 months ago
Fix memory leaks on failed CRAM encode.
James Bonfield
More... 6 months ago
Fix @PG linking when records make a loop
Rob Davies
More... 6 months ago
Improve the fuzzer to write BAM/CRAM and BCF too.
James Bonfield
More... 6 months ago
Prevent extend_ref from making huge mallocs on very sparse data.
James Bonfield
More... 6 months ago
Protect against CRAM slice end going beyond end of reference.
James Bonfield
More... 6 months ago
Check for 64-bit values in BETA codec initialiser.
James Bonfield
More... 6 months ago
Don't call cram_ref_decr on consensus-based references.
James Bonfield
More... 6 months ago
Fix out by one error on extend_ref memory allocation.
James Bonfield
More... 6 months ago
Remove memory leak when cram_encode_container fails during a close.
James Bonfield
More... 6 months ago