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Commits : Listings

Analyzed about 2 hours ago. based on code collected about 20 hours ago.
May 16, 2023 — May 16, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Added the ability for the GFFParser to interpret a few 'directive' lines like "##IGB-group-by transcript_id" "##IGB-filter-clear" "##IGB-filter-include transcript" and "##IGB-filter-exclude transcript cluster intron".
Ed Erwin
as chyekk
More... over 19 years ago
Changed dynamically loaded class names from "unibrow" to "igb". More... over 19 years ago
Adding adjustment to maximize edges of transfrags when resolution is high. More... over 19 years ago
Ignoring the javadoc directory.
Ed Erwin
as chyekk
More... over 19 years ago
Initial version of an ant build script.
Ed Erwin
as chyekk
More... over 19 years ago
Added the docs directory.
Ed Erwin
as chyekk
More... over 19 years ago
Switched from building classes into a "build" directory. Now putting the built classes in the same directories as the java files. This makes the build.xml file simpler, and more similar to the one in the genometry_sdk package.
Ed Erwin
as chyekk
More... over 19 years ago
Added "docs" directory
Ed Erwin
as chyekk
More... over 19 years ago
Repaired javadocs
Ed Erwin
as chyekk
More... over 19 years ago
Filling out what was previously just a stub -- now it's a working glyph factory for making CoverageSummaryGlyphs. Still need to implement correct setting of glyph data model. More... over 19 years ago
Enhanced to allow different styles: COVERAGE and SIMPLE Fixed bug so that color is set corectly. Fixed bug where plot baseline was disappearing More... over 19 years ago
Removed import statements that weren't needed. More... over 19 years ago
Updated the "year" property.
Ed Erwin
as chyekk
More... over 19 years ago
Removing an out-dated build file.
Ed Erwin
as chyekk
More... over 19 years ago
Fixed bug in reporting of QuickloadUrl More... over 19 years ago
Fixed bug in exporter that was causing NullPointerException errors in some situations. Set default graph style to heat map. More... over 19 years ago
Fixed bug in AffyTieredMultiMap that resulted ExperimentPivotView experimental result graph/heamap panel not responding to horizontal scaler. More... over 19 years ago
Ignore list created More... over 19 years ago
Changed igb_default_prefx.xml to default to using pivot view. More... over 19 years ago
Added handling of ".sin" format version 2, which adds a annotation id. More... over 19 years ago
Added id to IndexedSingletonSym (and appropriate handling for id to be considered a property) More... over 19 years ago
Incrementing IGB version More... over 19 years ago
Adding entry for "sgr" graph format in file chooser. More... over 19 years ago
Cleaned-up the logic in the removeFeatureFilter() method. It was technically incorrect, though I doubt it would have ever caused a real bug.
Ed Erwin
as chyekk
More... over 19 years ago
License for IGB code, including genoviz (formerly NGSDK) and genometry.
Ed Erwin
as chyekk
More... over 19 years ago
Initial revision
Ed Erwin
as chyekk
More... over 19 years ago
Initial revision
Ed Erwin
as chyekk
More... over 19 years ago
*** empty log message *** More... over 19 years ago
Initial revision
Ed Erwin
as chyekk
More... over 19 years ago
New repository initialized by cvs2svn. More... over 19 years ago