R

Ray, a de novo assembler using MPI 2.2

0

I Use This!

Inactive

Commits : Listings

Analyzed about 14 hours ago. based on code collected about 14 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jul 29, 2024 — Jul 29, 2025 Showing page 2 of 90 Search / Filter on:
SequenceKmerReader : fix kmer length shorter of 1 nt	Maxime Déraspe	More...				over 11 years ago
Correction made after Sebastien's review	Maxime Déraspe	More...				over 11 years ago
Removed debug in code	Maxime Déraspe	More...				over 11 years ago
Added GenomeAssemblyReader and SequenceKmerReader to the Makefile	Maxime Déraspe	More...				over 11 years ago
Changed Mother class to distinguish between a graph reader and a sequence assembly reader	Maxime Déraspe	More...				over 11 years ago
Added 2 classes : SequenceKmerReader (read a fasta file into kmers, GenomeAssemblyReader : the actor to manage the creation of kmers and offloading to the storekeeper	Maxime Déraspe	More...				over 11 years ago
added .gitignore for conviviality	Maxime Déraspe	More...				over 11 years ago
update releases	Sébastien Boisvert	More...				over 11 years ago
version 2.3.1	Sébastien Boisvert	More...				over 11 years ago
Surveyor: don't miss last line	Maxime Déraspe	More...				over 11 years ago
use CONFIG_ASSERT instead of ASSERT for optional code	Sébastien Boisvert	More...				over 11 years ago
fix compilation error on Apple OS X Mavericks	Sébastien Boisvert	More...				over 11 years ago
add option -graph-only to stop after graph building	Sébastien Boisvert	More...				over 11 years ago
seeds: add a parameter -minimum-seed-length (default 100)	Sébastien Boisvert	More...				over 11 years ago
Surveyor: fix compilation issue without debug code	Sébastien Boisvert	More...				over 11 years ago
SeedingData: provide prototypes for friend functions	Sébastien Boisvert	More...				over 11 years ago
Surveyor: report 0 hits when necessary	Sébastien Boisvert	More...				over 11 years ago
documentation: add license in README	Sébastien Boisvert	More...				over 11 years ago
report invalid edges as warnings instead of errors	Sébastien Boisvert	More...				over 11 years ago
Surveyor: support nucleotides in lower case	Sébastien Boisvert	More...				over 11 years ago
fix reproducibility issue for similarity and distance matrices	Sébastien Boisvert	More...				over 11 years ago
add some code to test directed surveys with Surveyor	Sébastien Boisvert	More...				over 11 years ago
print number of payloads	Sébastien Boisvert	More...				over 11 years ago
fix a bug when the number of ranks is a prime number	Sébastien Boisvert	More...				over 11 years ago
fix infinite loop when running on 2 CPU cores	Sébastien Boisvert	More...				over 11 years ago
next release will be 2.3.1	Sébastien Boisvert	More...				over 11 years ago
update release procedure	Sébastien Boisvert	More...				over 11 years ago
coloring: added comments for coloring subsystem	Sébastien Boisvert	More...				over 11 years ago
Surveyor: skip invalid files	Sébastien Boisvert	More...				over 11 years ago
Searcher: disable verbose outputs	Sébastien Boisvert	More...				over 11 years ago

←
1
2
3
4
5
6
7
8
9
…
89
90
→