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Analyzed about 22 hours ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
May 05, 2023 — May 05, 2024 Showing page 526 of 527 Search / Filter on:
* empty log message *	jchang	More...				about 24 years ago
new code to work with Entrez	jchang	More...				about 24 years ago
lots of changes, still under heavy development	jchang	More...				about 24 years ago
modified RecordConsumer so it gets rid of the newlines at the end of some members	jchang	More...				about 24 years ago
fixed bugs in RecordConsumer organism_classification database_cross_reference accessions noticed by [email protected]	jchang	More...				about 24 years ago
updated comments on sp007	jchang	More...				about 24 years ago
in a semi-workable state added Record.Comprehensive added NCBIStandalone.ComprehensiveParser and consumers still need to fix some data types, document, and optimize	jchang	More...				about 24 years ago
fixed bug in attempt_read_and_call where it was catching all SyntaxErrors, not just the ones raised by read_and_call. Now examines the traceback to make sure that the exception was generated by read_and_call.	jchang	More...				about 24 years ago
fixed bug in SProt noticed by [email protected] consumer required RX to contain exactly 3 columns, which broke on CLD1_HUMAN in release 39	jchang	More...				about 24 years ago
added code to work with Medline files	jchang	More...				about 24 years ago
todo list updates	jchang	More...				about 24 years ago
changed Scanner to _Scanner	jchang	More...				about 24 years ago
added classes _ListConsumer ListParser renamed Scanner to _Scanner added extract_keywords function	jchang	More...				about 24 years ago
fixed minor typo in doc string	jchang	More...				about 24 years ago
added Bio.Blast.Record.py (thanks to Christine Gemuend for pointing this out!) changed the default column width for Fasta.Record	jchang	More...				about 24 years ago
added SequenceParser, _SequenceConsumer	jchang	More...				about 24 years ago
added lots of SProt code added SwissProt tests regression tests broken added Index.py	jchang	More...				about 24 years ago
added lots of new code	jchang	More...				about 24 years ago
added new implementation of StringHandle that works with real files instead of pipes. This allows it to handle larger strings.	jchang	More...				about 24 years ago
documentation updates added some type checking	jchang	More...				about 24 years ago
updated FASTA interface broke all the testing code	jchang	More...				about 24 years ago
fixed bug in NamedSequence.__getattr__ was checking self.__dict__ when it didn't need to	jchang	More...				about 24 years ago
added SequenceConsumer to Fasta.py	jchang	More...				about 24 years ago
added a StringHandle to File.py removed open and urlopen functions from File.py scanners now take normal handles	jchang	More...				about 24 years ago
added an HSP section to the blast scanners updated testing code	jchang	More...				about 24 years ago
removed bt008. This test is too big to include.	jchang	More...				about 24 years ago
updated NCBIStandalone to work with Blast 2.0.11 added testing for new version half an implementation for a heavyweight consumer	jchang	More...				about 24 years ago
removed feed_one now only feeds 1 record at a time	jchang	More...				about 24 years ago
added some documentation	jchang	More...				about 24 years ago
fixed big in NamedSequence where it wasn't delegating __setattr__.	jchang	More...				about 24 years ago

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