| added Smith-Waterman algorithm (w/ tests) |
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over 11 years ago
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| flipped polarity of gap penalty arguments |
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over 11 years ago
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| condensed Nialls for future further use in comparison metrics |
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over 11 years ago
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| added tests for Needleman-Wunsch |
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over 11 years ago
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| fixed needleman-wunsch & added some associated tests |
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over 11 years ago
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| added sim_matrix function for matrix lookup of similarity values |
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over 11 years ago
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| added needleman_wunch algorithm |
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over 11 years ago
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| converted mx abbreviation to mat |
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over 11 years ago
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| added sim_ident & dist_ident tests corrected dist_ident call to sim_ident |
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over 11 years ago
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| added identity similarity/distance metrics |
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over 11 years ago
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| fixed some formulae to better deal with short terms |
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over 11 years ago
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| corrected comment formula, added Ochiai coefficient note |
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over 11 years ago
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| fixed cosine similarity metric according to correct definition |
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over 11 years ago
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| added some base case tests for Monge-Elkan |
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over 11 years ago
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| fixed order of Monge & Elkan for function call |
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over 11 years ago
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| switched order of Monge & Elkan to the usual order |
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over 11 years ago
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| switched sim & dist functions to take actual function pointers assorted pylint fixes |
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over 11 years ago
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| docstring corrections |
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over 11 years ago
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| added various QGrams tests for intersections & counts |
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over 11 years ago
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| added QGrams class, through which q-grams of a word may be interacted with as a multiset |
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over 11 years ago
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| added symmetric option to Elkan-Monge similarity function |
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over 11 years ago
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| added a basic Elkan-Monge implementation (refinement probably needed) |
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over 11 years ago
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| added general sim & dist functions |
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over 11 years ago
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| commented out phonet tests |
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over 11 years ago
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| switched numpy import to 'as np' intermediate commit (moving to another workstation to complete phonet implementation)--breakage possible |
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over 11 years ago
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| imported phonet rule list spacing |
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over 11 years ago
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| added tests for phonet |
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over 11 years ago
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| moved from bz2/zlib modules to use codecs exclusively (fixes a PyDev error) |
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over 11 years ago
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| pylint cleanup (incl. addition of pylint.rc file with settings/disables) |
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over 11 years ago
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| added phonet stub |
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over 11 years ago
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